Package: simulist 0.3.0.9000

Joshua W. Lambert

simulist: Simulate Disease Outbreak Line List and Contacts Data

Tools to simulate realistic raw case data for an epidemic in the form of line lists and contacts using a branching process. Simulated outbreaks are parameterised with epidemiological parameters and can have age structured populations, age-stratified hospitalisation and death risk and time-varying case fatality risk.

Authors:Joshua W. Lambert [aut, cre, cph], Carmen Tamayo [aut], Hugo Gruson [ctb, rev], Pratik R. Gupte [ctb, rev], Adam Kucharski [rev], Chris Hartgerink [rev]

simulist_0.3.0.9000.tar.gz
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simulist.pdf |simulist.html
simulist/json (API)
NEWS

# Install 'simulist' in R:
install.packages('simulist', repos = c('https://epiverse-trace.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/epiverse-trace/simulist/issues

On CRAN:

epidemiologyepiverselinelistoutbreaks

4 exports 5 stars 4.65 score 41 dependencies 23 scripts

Last updated 7 days agofrom:e379af4ec3. Checks:ERROR: 7. Indexed: yes.

TargetResultDate
Doc / VignettesFAILOct 04 2024
R-4.5-winERROROct 04 2024
R-4.5-linuxERROROct 04 2024
R-4.4-winERROROct 04 2024
R-4.4-macERROROct 04 2024
R-4.3-winERROROct 04 2024
R-4.3-macERROROct 04 2024

Exports:create_configsim_contactssim_linelistsim_outbreak

Dependencies:backportsbriocallrcheckmateclicrayondata.tabledescdiffobjdigestdistcretedistributionalepiparameterevaluatefansifsgenericsgluejsonlitelifecyclemagrittrnumDerivpillarpkgbuildpkgconfigpkgloadpraiseprocessxpsR6randomNamesrematch2rlangrprojroottestthattibbletoOrdinalutf8vctrswaldowithr