Package: vaccineff 0.0.3
vaccineff: Estimate Vaccine Effectiveness Based on Different Study Designs
R package with tools for estimating vaccine effectiveness and vaccine related metrics.
Authors:
vaccineff_0.0.3.tar.gz
vaccineff_0.0.3.zip(r-4.5)vaccineff_0.0.3.zip(r-4.4)vaccineff_0.0.3.zip(r-4.3)
vaccineff_0.0.3.tgz(r-4.4-any)vaccineff_0.0.3.tgz(r-4.3-any)
vaccineff_0.0.3.tar.gz(r-4.5-noble)vaccineff_0.0.3.tar.gz(r-4.4-noble)
vaccineff_0.0.3.tgz(r-4.4-emscripten)vaccineff_0.0.3.tgz(r-4.3-emscripten)
vaccineff.pdf |vaccineff.html✨
vaccineff/json (API)
NEWS
# Install 'vaccineff' in R: |
install.packages('vaccineff', repos = c('https://epiverse-trace.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/epiverse-trace/vaccineff/issues
- cohortdata - Cohort data on vaccineff
epidemiologyepiversevaccine-effectiveness
Last updated 2 days agofrom:9e183c78c7. Checks:OK: 6 ERROR: 1. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Sep 16 2024 |
R-4.5-win | OK | Sep 16 2024 |
R-4.5-linux | OK | Sep 16 2024 |
R-4.4-win | OK | Sep 16 2024 |
R-4.4-mac | OK | Sep 16 2024 |
R-4.3-win | OK | Sep 16 2024 |
R-4.3-mac | ERROR | Sep 16 2024 |
Exports:coh_coverageeffectivenessget_age_groupget_datasetmake_immunizationmatch_cohortplot_coverageplot_survival
Dependencies:backportscheckmatechkclicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatchItMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerRcppRcppProgressrlangscalessurvivaltibbleutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Calculate Vaccine Coverage | coh_coverage |
Cohort data on vaccineff | cohortdata |
Estimate Vaccine Effectiveness (VE) | effectiveness |
Construct age-group variable from age column | get_age_group |
Generic Function for Extracting Datasets | get_dataset |
Function for Extracting Matched Dataset | get_dataset.match |
Construct Information of Immunization | make_immunization |
Match Cohort to Reduce Observational Bias | match_cohort |
Plot Vaccine Coverage | plot_coverage |
Plot the Survival Probability Based on the Kaplan-Meier Model | plot_survival |
Function for Extracting VE plot | plot.effectiveness |
Summarize VE Results | summary.effectiveness |
Summarize Matching Results | summary.match |