Package: vaccineff 1.0.1

Zulma M. Cucunubá

vaccineff: Estimate Vaccine Effectiveness Based on Different Study Designs

Provides tools for estimating vaccine effectiveness and related metrics. The 'vaccineff_data' class manages key features for preparing, visualizing, and organizing cohort data, as well as estimating vaccine effectiveness. The results and model performance are assessed using the 'vaccineff' class.

Authors:David Santiago Quevedo [aut], Zulma M. Cucunubá [aut, cre], International Development Research Center [fnd], Geraldine Gómez Millán [ctb], Pratik Gupte [ctb], Érika J Cantor [ctb], Santiago Loaiza [ctb], Jaime Pavlich-Mariscal [ctb], Hugo Gruson [ctb], Chris Hartgerink [ctb], Felipe Segundo Abril [ctb], Joshua W. Lambert [ctb], Julian Otero [ctb], Pontificia Universidad Javeriana [cph]

vaccineff_1.0.1.tar.gz
vaccineff_1.0.1.zip(r-4.7)vaccineff_1.0.1.zip(r-4.6)vaccineff_1.0.1.zip(r-4.5)
vaccineff_1.0.1.tgz(r-4.6-any)vaccineff_1.0.1.tgz(r-4.5-any)
vaccineff_1.0.1.tar.gz(r-4.7-any)vaccineff_1.0.1.tar.gz(r-4.6-any)
vaccineff_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
vaccineff/json (API)

# Install 'vaccineff' in R:
install.packages('vaccineff', repos = c('https://epiverse-trace.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/epiverse-trace/vaccineff/issues

Pkgdown/docs site:https://epiverse-trace.github.io

Datasets:

On CRAN:

Conda:

epidemiologyepiversevaccine-effectiveness

6.75 score 16 stars 13 scripts 183 downloads 3 exports 28 dependencies

Last updated from:49ef36f3c4. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK123
source / vignettesOK211
linux-release-x86_64OK135
macos-release-arm64OK97
macos-oldrel-arm64OK113
windows-develOK114
windows-releaseOK96
windows-oldrelOK95
wasm-releaseOK125

Exports:estimate_vaccineffget_age_groupmake_vaccineff_data

Dependencies:backportscheckmatechkclicpp11farverggplot2gluegtableisobandlabelinglatticelifecyclelinelistMatchItMatrixR6RColorBrewerRcppRcppProgressrlangS7scalessurvivaltidyselectvctrsviridisLitewithr

Introduction to cohort design with vaccineff
Cohort Design | Estimating VE without iterative matching process | Estimating VE with iterative matching process | References
Rendered fromcohort_design.Rmdusingknitr::rmarkdown

Last update: 2024-11-24
Started: 2024-09-20

vaccineff
Usage | Who are the users / potential users? | What is vaccine effectiveness? | For which designs is this package? | Cohort Design | What type of data is needed to use the package? | Data for Cohort design | Modeling vaccine effectiveness | VE for Cohort design | Key references
Rendered fromvaccineff.Rmdusingknitr::rmarkdown

Last update: 2024-11-24
Started: 2023-07-05

Other study designs
Test Negative Design (Future release) | Screening Method (Future release) | What type of data is needed? | Data for Test-negative design | Data for Screening method design
Rendered fromother_designs.Rmdusingknitr::rmarkdown

Last update: 2024-10-12
Started: 2024-09-20